Update CI installation of h5py and petsc4py after release of setuptools 81.0#573
Merged
Conversation
Updated the git clone command to use 'release' branch of petsc instead of specific version, because of an install problem with petsc4py
Coverage summary from CodacySee diff coverage on Codacy
Coverage variation details
Coverage variation is the difference between the coverage for the head and common ancestor commits of the pull request branch: Diff coverage details
Diff coverage is the percentage of lines that are covered by tests out of the coverable lines that the pull request added or modified: See your quality gate settings Change summary preferencesFootnotes
|
Replaced direct h5py installation with cloning and building from source.
This reverts commit 4193b7f.
h5py and pets4py after release of setuptools 81.0
h5py and pets4py after release of setuptools 81.0h5py and petsc4py after release of setuptools 81.0
h5py and petsc4py after release of setuptools 81.0h5py and petsc4py after release of setuptools 81.0
auto-merge was automatically disabled
February 13, 2026 10:19
Pull request was converted to draft
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
On 06 Feb 2026
setuptools v81.0.0was released with breaking changes, i.e. the support for the parameter--dry-runwas removed fromsetup.py. As a consequence, our installed versions ofh5pyandpetsc4pyhave stopped working. As a temporary fix for our CI workflows, we install the latest package versions from their respective repositories, where the issue has been fixed.Detailed list of changes
h5pyfrom GitHub (masterbranch) and build it from sources, instead of installing the latest release from PyPI.git clonecommand to download the 'release' branch instead of a broken version. Hence we install the latest package from the official GitLab repository. (When a new version number is available, we can point thegit clonecommand to it.)