Dan's version of the Dynamically Simple Model for Atmospheric Chemical Complexity --- still in development/testing

Emmerson, KM; Evans, MJ (2009) Comparison of tropospheric gas-phase chemistry schemes for use within global models, ATMOS CHEM PHYS, 9(5), pp1831-1845 doi: 10.5194/acp-9-1831-2009 .

Run make new to clean everything, update latest TUV, and download KPP. In order to initialise all submodules correctly, you need to have a clean repository.

This needs to be done to include contents here. Can be accomplished through git submodule init; git submodule update or typing make update_submodule

1. How to compile
2. How to run
3. Errors
4. How to plot
5. Advanced features
6. Updating TUV
7. GeosCHEM
8. Changes

Type make man to see a description of available functions.

• MCM subset selector in mechanisms - this uses an init cons file to generate the smallest mechanism required by the model.
• read DSMACC output routine in analysis tools.
• plot all concentrations / reaction rates as a PDF for diagnostics in analysis tools and ropa tool
• animated ropa plotter (alternatively you can use the online version - link to be added soon)

• Ifort (Intel)
• Netcdf4 (python)
• Anacondas Python (continuum.io)
• icc & bison for kpp
• perl