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Design of an extensive information representation scheme for clinical narratives
2017
Journal of Biomedical Semantics
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This work aims to develop an extensive information representation scheme for clinical information contained in EHR narratives, and to support secondary use of EHR narrative data to answer clinical questions ...
Results: We devised a new information representation scheme for clinical narratives that comprises 13 entities, 11 attributes and 37 relations. ...
Acknowledgements The authors would like to thank Cyril Grouin, Thierry Hamon and Pierre Zweigenbaum for fruitful discussions on the design and representation of the scheme. ...
doi:10.1186/s13326-017-0135-z
pmid:28893314
pmcid:PMC5594525
fatcat:c2fe56mxpjfc5epju7mpjlgra4
Temporal reasoning over clinical text: the state of the art
2013
JAMIA Journal of the American Medical Informatics Association
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Scope We review the major applications of text-based temporal reasoning, describe the challenges for software systems handling temporal information in clinical text, and give an overview of the state of ...
Objectives To provide an overview of the problem of temporal reasoning over clinical text and to summarize the state of the art in clinical natural language processing for this task. ...
For structured data, Augusto 6 presented an extensive review of the literature on temporal database design that supports clinical decision making in diagnosis, prognosis, and treatment. ...
doi:10.1136/amiajnl-2013-001760
pmid:23676245
pmcid:PMC3756277
fatcat:e4ehiljfcfekhlklclj2lbiebe
IMIA LaMB WG events: Summary (as an editorial in the Proceedings) of the IMIA WG 6 Vevey workshop, 1994
2019
Zenodo
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Inform. Med., Vol. 34, No. 112, 1995" ...
This Editorial sums up and lists the workshop papers, is titled as "Concepts, Knowledge, and Language in Health-Care Information Systems", authored by A. T. McCray, J.-R. Scherrer, C. Safran, and G. ...
Acknowledgments The editors would like to acknowledge the hard work of the following individuals who served as rapporteurs at the IMIA WG 6 confer- ...
doi:10.5281/zenodo.3378743
fatcat:zx7xtdarqjg3hdsdimkbwdwbcu
GOALS
2015
Proceedings of the 5th International Conference on Digital Health 2015 - DH '15
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Elaboration of an evaluation scheme to define the levels of support of the methodology. 4. ...
Development of a multi-step methodology for an automatic translation process, independent from the target CIG language. 3. ...
It focused, both, on the development of a temporal relation annotation scheme and an annotation guideline for clinical free texts. ...
doi:10.1145/2750511.2750520
dblp:conf/ehealth/WenzinaK15
fatcat:7lhibrxdffh6bjgcnllurasotu
ASSESSING THE ROLE OF ARTIFICIAL INTELLIGENCE IN THE DESIGN OF DRUG DELIVERY SYSTEMS
2020
International Journal of Medical Science and Diagnosis Research
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The request of the computerized workflows and databases for quick calculation of the vast amounts of data and artificial neural networks (ANNs) for growth of the narrative proposition and treatment schemes ...
Over ten years, increasing the interest has been fascinated towards the appeal of intelligent retrieval (IR) technology for data interpretation and illuminate the biological or transmitted information, ...
Artificial intelligence vs. natural stupidity: Evaluating AI readiness for the vietnamese medical information system. Journal of clinical medicine. 2019 Feb;8(2):168. 35. ...
doi:10.32553/ijmsdr.v4i12.725
fatcat:i3o6c4lbw5da7a4shwoo5ihew4
CQL4NLP: Development and Integration of FHIR NLP Extensions in Clinical Quality Language for EHR-driven Phenotyping
2021
AMIA Annual Symposium Proceedings
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An NLP ruleset generation mechanism was integrated into the NLP2FHIR pipeline and the NLP rulesets enabled comparable performance for a case study with the identification of obesity comorbidities. ...
Lack of standardized representation of natural language processing (NLP) components in phenotyping algorithms hinders portability of the phenotyping algorithms and their execution in a high-throughput ...
The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. ...
pmid:34457178
pmcid:PMC8378647
fatcat:m5yejihj4nhqnggnrmvjwshgvq
Critical issues in an electronic documentation system
2007
AMIA Annual Symposium Proceedings
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Although electronic documentation is easier to read and improves access to information, it also may create new and additional hazards for users. ...
Eighty-eight providers across multiple clinical roles were interviewed in 10 primary care sites in the VA system. Interviews were tape-recorded, transcribed and qualitatively analyzed for themes. ...
Finally, narrative text is the main source of information for legal and quality review purposes. Electronic notes facilitate clinical communication in some ways. ...
pmid:18693944
pmcid:PMC2655797
fatcat:vnygy4pajnfhtodsvzqq6stulm
Discovering Temporal Narrative Containers in Clinical Text
2013
Workshop on Biomedical Natural Language Processing
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The clinical narrative contains a great deal of valuable information that is only understandable in a temporal context. ...
Events, time expressions, and temporal relations convey information about the time course of a patient's clinical record that must be understood for many applications of interest. ...
Thanks to the anonymous reviewers for thorough and insightful comments. ...
dblp:conf/bionlp/MillerBDPLS13
fatcat:shlfeyvgobgtnfksk6quzlkdxm
The learning intelligent distribution agent (LIDA) and medical agent X (MAX): Computational intelligence for medical diagnosis
2014
2014 IEEE Symposium on Computational Intelligence for Human-like Intelligence (CIHLI)
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We review LIDA's approach to exploring cognition, assert its appropriateness for problem solving in complex domains such as diagnosis, and outline the design of an initial implementation for MAX. ...
Building on earlier work, we claim that the systemslevel cognitive model LIDA (for "Learning Intelligent Distribution Agent") offers a number of specific advantages for modeling diagnostic thinking. ...
Thus, pre-processing of the MIMIC-II text files required extensive manual review of the raw files to develop regular expressions capable of detecting the desired narrative sections. ...
doi:10.1109/cihli.2014.7013390
dblp:conf/cihli/StrainKF14
fatcat:qhxoztt4dzbx5jhnpb6jhodjh4
Sağlik-Net Project In Turkey And Hl7 V3 Implementation
2008
Zenodo
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This paper describes Clinical Document Architecture Release Two (CDA R2) standard and a client application for messaging with SAĞLIK-NET project developed by The Ministry of Health of Turkey. ...
In this study, a client application compatible with HL7 V3 for a project named SAĞLIKNET, aimed to build a National Health Information System by Turkey. ...
The RIM is an essential part of the HL7 Version 3 development methodology, as it provides an explicit representation of the semantic and lexical connections that exist between the information carried in ...
doi:10.5281/zenodo.1070518
fatcat:zmzkihhxh5dhzilp3nl5xdarwq
MediClass: A System for Detecting and Classifying Encounter-based Clinical Events in Any Electronic Medical Record
2005
JAMIA Journal of the American Medical Informatics Association
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This technology aims to optimize both clinical practice and process control by automatically coding EMR contents regardless of data input method (e.g., dictation, structured templates, typed narrative) ...
We report on the design goals, implemented functionality, generalizability, and current status of the system. ...
The MediClass classification engine was designed to support extensive handling of the rich knowledge representation produced by the Concept Identification layer. ...
doi:10.1197/jamia.m1771
pmid:15905485
pmcid:PMC1205600
fatcat:o7sbbby4enende7oonyscz6k7e
The InterMed Approach to Sharable Computer-interpretable Guidelines: A Review
2004
JAMIA Journal of the American Medical Informatics Association
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representation formats, (3) the role of cognitive methodology to evaluate and assist in the evolutionary development process, (4) development of an architecture and (5) design principles for sharable ...
medical knowledge representation formats, and (6) a process for standardization of a CIG modeling language. * The group was lead by VLP, who subsequently moved to Columbia University. y More information ...
With the framework that we developed, we investigated how designers and users comprehend and represent information found in clinical guidelines and subsequently utilize their representation for solving ...
doi:10.1197/jamia.m1399
pmid:14527977
pmcid:PMC305452
fatcat:57e4pbbrezbeviq37md53uptle
Development and initial validation of the Odense Child Trauma Screening: a story stem screening tool for preschool and young schoolchildren
2021
Scandinavian Journal of Child and Adolescent Psychiatry and Psychology
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OCTS was developed to screen for play-based behavior and narrative representations indicative of traumatization in preschool and young schoolchildren. ...
OCTS shows promise as a standardized, age-appropriate informant-based screening measure applicable for clinical assessment. ...
Clinical significance The present study provides preliminary evidence of the reliability and validity of the Danish OCTS, which was developed to screen for play-based behavior and narrative representations ...
doi:10.21307/sjcapp-2021-013
pmid:34195104
pmcid:PMC8216242
fatcat:mnjkndvvc5dupcejro4jarnmie
HELEN, a Modular Framework for Representing and Implementing Clinical Practice Guidelines
2004
Methods of Information in Medicine
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We have shown the fruitful combination of different knowledge representations such as narrative text and algorithm for implementing CPGs. ...
Objectives: In order to implement clinical practice guidelines for the Department of Neonatology of the Heidelberg University Medical Center we developed a modular framework consisting of tools for authoring ...
Becker for his contribution in developing CPGs for the Department of Ophthalmology of the University Medical Center Heidelberg. ...
doi:10.1055/s-0038-1633885
pmid:15472756
fatcat:cg4avx7csjbehgma3pwdwdky4i
Tools to facilitate the interchange and analysis of nontraditional health surveillance data
2003
Journal of urban health
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Conceptual models are the core of robust classification schemes (e.g., SNOMED-RT, GALEN) and emerging standards for the exchange of health care information (e.g., HL-7). ...
An explicit conceptual model is what guides aggregation of "units of information" and will be an essential component of successful surveillance systems. ...
To meet these needs, we have developed a flexible, extensible ontology (metadata model). Most data standards attempt to preenumerate fields and formats for every needed piece of information. ...
doi:10.1007/bf02416918
fatcat:l4a7nax7vjclhnry42gzzq45gi
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