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The Sloop System for Individual Animal Identification with Deep Learning [article]

Kshitij Bakliwal, Sai Ravela
2020 arXiv   pre-print
We then show that priming with amplitude and deformation features requires very shallow networks to produce superior recognition results.  ...  To do this, it adaptively represents and matches generic visual feature representations using sparse relevance feedback from experts and crowds.  ...  "Pre-conditioning" with extracted features appears important to improve neural performance.  ... 
arXiv:2003.00559v1 fatcat:hemvrecmmredlfogbfoca2hn6q

Past, Present, and Future Approaches Using Computer Vision for Animal Re-Identification from Camera Trap Data [article]

Stefan Schneider, Graham W. Taylor, Stefan S. Linquist, Stefan C. Kremer
2018 arXiv   pre-print
By utilizing novel deep learning methods for object detection and similarity comparisons, ecologists can extract animals from an image/video data and train deep learning classifiers to re-ID animal individuals  ...  In this review, we describe a brief history of camera traps for re-ID, present a collection of computer vision feature engineering methodologies previously used for animal re-ID, provide an introduction  ...  By considering modern deep learning approaches, ecologists can utilize improve accuracies without the requirement of handcoded feature extraction methods by training a neural network from large amounts  ... 
arXiv:1811.07749v1 fatcat:5mjlhtc3tfgvnnfsxb5b5z7ij4

Past, present and future approaches using computer vision for animal re‐identification from camera trap data

Stefan Schneider, Graham W. Taylor, Stefan Linquist, Stefan C. Kremer, Robert B. O'Hara
2019 Methods in Ecology and Evolution  
By utilizing novel deep learning methods for object detection and similarity comparisons, ecologists can extract animals from an image/video data and train deep learning classifiers to re-ID animal individuals  ...  For decades, ecologists with expertise in computer vision have successfully utilized feature engineering to extract meaningful features from camera trap images to improve the statistical rigor of individual  ...  then extracting features (i.e. spots) using the SIFT algorithm.  ... 
doi:10.1111/2041-210x.13133 fatcat:wgfpo4mg6zbazhbzxfnp2dmkoq

Object-of-Interest Perception in a Reconfigurable Rolling-Crawling Robot

Archana Semwal, Melvin Ming Jun Lee, Daniela Sanchez, Sui Leng Teo, Bo Wang, Rajesh Elara Mohan
2022 Sensors  
We train the locomotion mode recognition framework, named Pyramid Scene Parsing Network (PSPNet), with a self-collected dataset composed of two categories paths, unobstructed paths (e.g., floor) for rolling  ...  and obstructed paths (e.g., with person, railing, stairs, static objects and wall) for crawling, respectively.  ...  Neural network (PNN), Complementary Neural Network (CMTNN), and Space Invariant Artificial Neural Networks (SIANN) or Convolutional Neural Network (CNN) [21] .  ... 
doi:10.3390/s22145214 pmid:35890893 pmcid:PMC9315741 fatcat:njyegwwh7jfizhv52pz5aihkmy

Revealing Fine Structures of the Retinal Receptive Field by Deep Learning Networks [article]

Qi Yan, Yajing Zheng, Shanshan Jia, Yichen Zhang, Zhaofei Yu, Feng Chen, Yonghong Tian, Tiejun Huang, Jian K. Liu
2020 arXiv   pre-print
Deep convolutional neural networks (CNNs) have demonstrated impressive performance on many visual tasks. Recently, they became useful models for the visual system in neuroscience.  ...  Taken together, these results suggest that CNNs could be used to reveal structure components of neuronal circuits, and provide a powerful model for neural system identification.  ...  a conv filter as a feature detector to extract useful information from input images [?]  ... 
arXiv:1811.02290v2 fatcat:v7wmejxsm5c4tcm7dkricljdri

Neural Activity Classification with Machine Learning Models Trained on Interspike Interval Time-Series Data [article]

Ivan Lazarevich, Ilya Prokin, Boris Gutkin, Victor Kazantsev
2021 bioRxiv   pre-print
Modern well-performing approaches to neural decoding are based on machine learning models such as decision tree ensembles and deep neural networks.  ...  We demonstrate that an approach based on hand-crafted time-series feature engineering establishes a strong baseline performing on par with state-of-the-art deep learning based models for neural decoding  ...  Such approaches include automated time series phenotyping implemented in the hctsa MATLAB package [19] and automated feature extraction in the tsfresh Python package [20] .  ... 
doi:10.1101/2021.03.24.436765 fatcat:ii4c2byzijcfbkm2kactrwodqa

A Retinotopic Spiking Neural Network System for Accurate Recognition of Moving Objects Using NeuCube and Dynamic Vision Sensors

Lukas Paulun, Anne Wendt, Nikola Kasabov
2018 Frontiers in Computational Neuroscience  
This paper introduces a new system for dynamic visual recognition that combines bio-inspired hardware with a brain-like spiking neural network.  ...  The NeuCube architecture can be used to visualize the deep connectivity inside the network before, during, and after training and thereby allows for a better understanding of the learning processes.  ...  ACKNOWLEDGMENTS The authors thank the reviewers for the useful comments and suggestions.  ... 
doi:10.3389/fncom.2018.00042 pmid:29946249 pmcid:PMC6006267 fatcat:rrz2o2qd4rcenlp4ylyocwcvea

Neurorobotics—A Thriving Community and a Promising Pathway Toward Intelligent Cognitive Robots

Jeffrey L. Krichmar
2018 Frontiers in Neurorobotics  
In another example, a Deep Belief Neural Network was trained for object recognition and robot grasping (Hossain and Capi, 2016) .  ...  In addition, deep neural networks have been used for robotic applications with promising results.  ...  The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in  ... 
doi:10.3389/fnbot.2018.00042 pmid:30061820 pmcid:PMC6054919 fatcat:4ifhalmz2zeohndsjmulbceywi

Towards Detecting and Classifying Network Intrusion Traffic Using Deep Learning Frameworks

Ram B. Basnet, Riad Shash, Clayton Johnson, Lucas Walgren, Tenzin Doleck
2019 Journal of Internet Services and Information Security  
We apply and compare various state-of-the-art deep learning frameworks (e.g., Keras, TensorFlow, Theano, fast.ai, and PyTorch) in detecting network intrusion traffic and also in classifying common network  ...  attack types using the recent CSE-CIC-IDS2018 dataset.  ...  Any opinions, findings and conclusions, or recommendations expressed in this paper are those of the authors and do not necessarily reflect the views of the funding sources.  ... 
doi:10.22667/jisis.2019.11.30.001 dblp:journals/jisis/BasnetSJWD19 fatcat:xzzxwqpzjzhiffdsxi6237n3qi

PLANT SPECIE CLASSIFICATION USING SINUOSITY COEFFICIENTS OF LEAVES

Jules R Kala, Serestina Viriri
2018 Image Analysis and Stereology  
Conserving the plants may require the development of an automated system that will identify plants using leaf features such as shape, color, and texture.  ...  The initial empirical experiments performed on the LeafSnap dataset on the usage of four sinuosity coefficients to characterize the leaf images using the Radial Basis Function Neural Network (RBF) and  ...  Kalyoncu and Toygar (2015) proposed a method for plant recognition using leaf images based on the combination of new and well know feature extraction techniques and classification algorithms.  ... 
doi:10.5566/ias.1821 fatcat:qf3szmpe55dubltydw3jqkh7s4

Machine learning and applications in microbiology

Stephen J Goodswen, Joel L N Barratt, Paul J Kennedy, Alexa Kaufer, Larissa Calarco, John T Ellis
2021 FEMS Microbiology Reviews  
of mathematicians and computer scientists.  ...  Our hope is to inspire microbiologists and other related researchers to join the emerging machine learning revolution.  ...  Heavily regularised models, feature extraction or fine-tuning of pre-trained deep neural networks can help with these problems. Validation of predictions from ML is challenging.  ... 
doi:10.1093/femsre/fuab015 pmid:33724378 pmcid:PMC8498514 fatcat:v6sobinw45b3rdecprof4k62su

The stability of memories during brain remodeling: A perspective

Douglas J Blackiston, Tal Shomrat, Michael Levin
2015 Communicative & Integrative Biology  
O ne of the most important features of the nervous system is memory: the ability to represent and store experiences, in a manner that alters behavior and cognition at future times when the original stimulus  ...  What can we learn from model species that exhibit both, regeneration and memory, with respect to robustness and stability requirements for long-term memories encoded in living tissues?  ...  Pai, and Jennifer Hammelman for their helpful suggestions on the manuscript. This work was supported by the Templeton World Charity Foundation (TWCF0089/AB55) and the G. Harold and Leila Y.  ... 
doi:10.1080/19420889.2015.1073424 pmid:27066165 pmcid:PMC4802789 fatcat:dcxbwrciarbk3g5rxbylaq3siu

Neurorobots as a Means Toward Neuroethology and Explainable AI

Kexin Chen, Tiffany Hwu, Hirak J. Kashyap, Jeffrey L. Krichmar, Kenneth Stewart, Jinwei Xing, Xinyun Zou
2020 Frontiers in Neurorobotics  
Understanding why deep neural networks and machine learning algorithms act as they do is a difficult endeavor. Neuroscientists are faced with similar problems.  ...  In a similar way, neurorobotics can be used to explain how neural network activity leads to behavior. In real world settings, neurorobots have been shown to perform behaviors analogous to animals.  ...  AUTHOR CONTRIBUTIONS All authors listed have made a substantial, direct and intellectual contribution to the work, and approved it for publication.  ... 
doi:10.3389/fnbot.2020.570308 pmid:33192435 pmcid:PMC7604467 fatcat:37v42xxymbfuznceh4gofmuawy

Tag Prediction at Flickr: a View from the Darkroom [article]

Kofi Boakye, Sachin Farfade, Hamid Izadinia, Yannis Kalantidis, and Pierre Garrigues
2017 arXiv   pre-print
While deep convolutional neural networks have repeatedly demonstrated top performance on standard datasets for classification, there are a number of often overlooked but important considerations when deploying  ...  Automated photo tagging has established itself as one of the most compelling applications of deep learning.  ...  With deep neural networks being the de facto choice for image classification [21] , training models with thousands of classes and millions of parameters currently relies on access to large datasets of  ... 
arXiv:1612.01922v3 fatcat:y5ek65nfancwpfg3ddk4txc7wq

Species Classification for Neuroscience Literature Based on Span of Interest Using Sequence-to-Sequence Learning Model

Hongyin Zhu, Yi Zeng, Dongsheng Wang, Cunqing Huangfu
2020 Frontiers in Human Neuroscience  
We propose SpecExplorer project which is used to explore the knowledge associations of different species for brain and neuroscience.  ...  Therefore, in addition to dictionary-based methods, we need to mine species using cognitive computing models that are more like the human reading process, and these methods can take advantage of the rich  ...  Zhang and Zhou (2007) propose the BP-MLL with a fully-connected neural network and a pairwise ranking loss function.  ... 
doi:10.3389/fnhum.2020.00128 pmid:32372933 pmcid:PMC7187631 fatcat:6y2jop65fvgdpnhqt46tlfuuyi
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