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Digital pathology in personalized cancer therapy

Janina Słodkowska, Marcial Garcia Rojo
2012 Folia Histochemica et Cytobiologica  
Digital microscopy is an important tool for surgical pathologists.  ...  Digital image analysis is now available in a variety of platforms to improve quantification performance of diagnostic pathology.  ...  Digital microscopy creates a digital version of whole glass slides (WSI, Whole Slide Image), which can be dynamically viewed, navigated and magnified on a monitor across a computer network.  ... 
doi:10.5603/fhc.2011.0080 fatcat:jazh6hqevrhvtpoqzbv3nrhrbu

Use of Web-based training for quality improvement between a field immunohistochemistry laboratory in Nigeria and its United States–based partner institution

Abideen O. Oluwasola, David Malaka, Andrey Ilyich Khramtsov, Offiong Francis Ikpatt, Abayomi Odetunde, Oyinlolu Olorunsogo Adeyanju, Walmy Elisabeth Sveen, Adeyinka Gloria Falusi, Dezheng Huo, Olufunmilayo Ibironke Olopade
2013 Annals of Diagnostic Pathology  
We found Web-based conferences and digital microscopy useful and cost-effective tools for quality assurance of IHC, consultation, and collaboration between distant laboratories.  ...  Two hundred and thirty-two breast tumor blocks were evaluated for estrogen receptors (ERs), progesterone receptors (PRs), and HER2 status at both laboratories using tissue microarray technique.  ...  In more advanced centers, highspeed, automated whole-slide imaging systems are being used to generate digital images of sufficient quality for pathologists to make reliable diagnostic decisions [21] .  ... 
doi:10.1016/j.anndiagpath.2013.07.003 pmid:24095629 fatcat:uvdtwfdhhzbath4ocmbiytoopi

Digital Technology in Diagnostic Breast Pathology and Immunohistochemistry

Emad A. Rakha, Konstantinos Vougas, Puay Hoon Tan
2021 Pathobiology (Basel)  
Digital technology has been used in the field of diagnostic breast pathology and immunohistochemistry (IHC) for decades.  ...  and eosin-stained digitalized images.  ...  quality control and quality assurance mea- sures, (iv) audits, training, and validation processes, (v) In breast pathology, IHC is used for diagnostic pur- slide sharing, and (vi) facilitating junior  ... 
doi:10.1159/000521149 pmid:34969036 fatcat:rx4rloc5vzch5cc2b7tlqcfxkq

Review of imaging solutions for integrated quantitative immunohistochemistry in the Pathology daily practice

Marcial GarcĂ­a Rojo, Gloria Bueno, Janina Slodkowska
2010 Folia Histochemica et Cytobiologica  
IHC interpretation based in whole slide imaging or virtual microscopy is of special interest.  ...  The objective of this work is to review the different computerbased programs for automatic immunohistochemistry and Fluorescence In Situ Hybridization (FISH) evaluation.  ...  Unlike manual reading, an automated analysis revealed that patients with breast tumours expressing normal levels of HER2 also showed a significantly worse outcome.  ... 
doi:10.2478/v10042-008-0114-4 pmid:20164017 fatcat:jmwzahchwvecvbrhlhopkokvdi

Tissue microarrays: leaping the gap between research and clinical adoption

Mark D Gustavson, David L Rimm, Marisa Dolled-Filhart
2013 Personalized Medicine  
Another study by Terry et al. used TMAs as part of an implementation of the Canadian External Quality Assurance program for breast cancer testing [61] .  ...  Requirement for automated & objective image-analysis tools The development of next-generation tissue-based diagnostic tests in the clinical laboratory will be critically reliant upon automated imaging  ... 
doi:10.2217/pme.13.42 pmid:29758838 fatcat:iyauigxkara5llzegnv32u5xqe

Nanogenomics and Artificial Intelligence: A Dynamic Duo for the Fight Against Breast Cancer

Batla S. Al-Sowayan, Alaa T. Al-Shareeda
2021 Frontiers in Molecular Biosciences  
Large volume of data generated by digitalized mammogram or whole-slide images can be interoperated through advanced machine learning.  ...  Thus, theoretically, through nanogenomicas, a profile of each breast tumor sub-type, estrogen receptor status, and potential metastasis site can be constructed.  ...  DL models are also being developed for digitalized hematoxylineosin (H&E)-stained whole-slide images.  ... 
doi:10.3389/fmolb.2021.651588 pmid:33937332 pmcid:PMC8082244 fatcat:46ff4ptyxbgrnjlq5bqoneioyq

Digital Imaging in Pathology: Whole-Slide Imaging and Beyond

Farzad Ghaznavi, Andrew Evans, Anant Madabhushi, Michael Feldman
2013 Annual Review of Pathology  
Digital imaging in pathology has undergone an exponential period of growth and expansion catalyzed by changes in imaging hardware and gains in computational processing.  ...  Today, digitization of entire glass slides at near the optical resolution limits of light can occur in 60 s. Whole slides can be imaged in fluorescence or by use of multispectral imaging systems.  ...  DIGITAL PATHOLOGY AND WHOLE-SLIDE IMAGING SYSTEMS: AN OVERVIEW Since the development of the first automated, high-resolution whole-slide imaging (WSI) system by Wetzel and Gilbertson in 1999 (described  ... 
doi:10.1146/annurev-pathol-011811-120902 pmid:23157334 fatcat:g7ba47thmjfvhbos7dxke4nsoy

Digital Image Analysis of Ki-67 Stained Tissue Microarrays and Recurrence in Tamoxifen-Treated Breast Cancer Patients

Nina Gran Egeland, Kristin Jonsdottir, Kristina Lystlund Lauridsen, Ivar Skaland, Cathrine F Hjorth, Einar G Gudlaugsson, Stephen Hamilton-Dutoit, Timothy L Lash, Deirdre Cronin-Fenton, Emiel AM Janssen
2020 Clinical Epidemiology  
We hypothesized that digital image analysis (DIA) of Ki-67 can be used to evaluate proliferation in breast cancer tumors, and that Ki-67 may be associated with tamoxifen resistance in early-stage breast  ...  Our findings suggest that Ki-67 digital image analysis in TMAs is not associated with increased risk of recurrence among tamoxifen-treated ER-positive breast cancer or ER-negative breast cancer patients  ...  Furthermore, the authors thank the Danish Breast Cancer Group for access to its registry data.  ... 
doi:10.2147/clep.s248167 pmid:32801916 pmcid:PMC7383278 fatcat:sjwf72pnljeupgzobr5x7chneu

Automated measurement of estrogen receptor in breast cancer: a comparison of fluorescent and chromogenic methods of measurement

Elizabeth R Zarrella, Madeline Coulter, Allison W Welsh, Daniel E Carvajal, Kurt A Schalper, Malini Harigopal, David L Rimm, Veronique M Neumeister
2016 Laboratory Investigation  
Whereas FDA-approved methods of assessment of estrogen receptor (ER) are 'fit for purpose', they represent a 30-year-old technology.  ...  In 10 cases, the Aperio nuclear algorithm labeled the nuclei as negative; in 1 case, the AQUA score was just under the cutoff for positivity (determined by an Index TMA).  ...  ACKNOWLEDGMENTS This project has been funded in whole or in part with federal funds from the National Cancer Institute, National Institutes of Health, under Contract No. HHSN261200800001E.  ... 
doi:10.1038/labinvest.2016.73 pmid:27348626 pmcid:PMC5008858 fatcat:xiho4puidzfdva6rjqw5xxmvw4

Artificial intelligence in breast cancer imaging: risk stratification, lesion detection and classification, treatment planning and prognosis—a narrative review

Maurizio Cè, Elena Caloro, Maria E. Pellegrino, Mariachiara Basile, Adriana Sorce, Deborah Fazzini, Giancarlo Oliva, Michaela Cellina
2022 Exploration of Targeted Anti-tumor Therapy  
The advent of artificial intelligence (AI) represents a real game changer in today's landscape of breast cancer imaging.  ...  The main challenges to the development of AI tools are the huge amounts of high-quality data required to train and validate these models and the need for a multidisciplinary team with solid machine-learning  ...  An AI-assisted lesion segmentation tool has been applied to automated whole breast US by Lee et al.  ... 
doi:10.37349/etat.2022.00113 pmid:36654817 pmcid:PMC9834285 fatcat:orelpodas5hpdogdy5lajvui2y

Cultivating Clinical Clarity through Computer Vision: A Current Perspective on Whole Slide Imaging and Artificial Intelligence

Ankush U. Patel, Nada Shaker, Sambit Mohanty, Shivani Sharma, Shivam Gangal, Catarina Eloy, Anil V. Parwani
2022 Diagnostics  
control and primary diagnosis applications.  ...  Ushered into the fray of modern laboratory medicine are digital imaging devices and machine-learning (ML) software fashioned to mitigate challenges, e.g., practitioner shortage while preparing clinicians  ...  Acknowledgments: Thank you to David Kellough, who provided photos of digital pathology integration at the Ohio State University (Columbus, OH, USA).  ... 
doi:10.3390/diagnostics12081778 pmid:35892487 pmcid:PMC9332710 fatcat:4cgjt665zbgidnpoeklwsmr6iy

Clinical Applications of Whole-slide Imaging in Anatomic Pathology

Zoya Volynskaya, Andrew J. Evans, Sylvia L. Asa
2017 Advances in Anatomic Pathology  
The development of whole-slide imaging has paved the way for digitizing of glass slides that are the basis for surgical pathology.  ...  The opportunities for applications of image analysis tools in a workflow will be changed by integration of whole-slide imaging into routine diagnosis.  ...  Algorithms have already been created for automated calculation of the breast biomarkers estrogen receptor, progesterone receptor, and Her2.  ... 
doi:10.1097/pap.0000000000000153 pmid:28590953 fatcat:vcdmcwrygrhyfj6iwn2jyikpnm

Quantification of Estrogen Receptor-Alpha Expression in Human Breast Carcinomas With a Miniaturized, Low-Cost Digital Microscope: A Comparison with a High-End Whole Slide-Scanner

Oscar Holmström, Nina Linder, Mikael Lundin, Hannu Moilanen, Antti Suutala, Riku Turkki, Heikki Joensuu, Jorma Isola, Vinod Diwan, Johan Lundin, Abhijit De
2015 PLoS ONE  
We evaluate the performance of the device in the digital assessment of estrogen receptor-alpha (ER) expression in breast cancer samples.  ...  Materials and Methods A total of 170 samples of human breast carcinoma, immunostained for ER expression, were digitized with a high-end slide-scanner and the point-of-care microscope.  ...  Yinhai Wang for helpful discussions, constructive feedback and assistance with the image analysis.  ... 
doi:10.1371/journal.pone.0144688 pmid:26659386 pmcid:PMC4684374 fatcat:4yy4x5tyxjfxtknzgk2ri6mfvi

Informatics

2015 Laboratory Investigation  
Design: 104 consecutive bone marrow biopsies were digitally scanned at 20x magnifi cation using an Aperio CS whole slide scanner. 89 cases had numeric manual cellularity scores and qualifi ed for comparison  ...  Adoption of digital imaging in the clinical laboratory also provides advantages including long term archival and quality assurance measures.  ...  Whole slide imaging technology is used for the telepathology consultation service.  ... 
doi:10.1038/labinvest.2015.17 fatcat:74eygyy7o5gkrhizoootoyfol4

Position paper: recommendations for a digital mammography quality assurance program V4.0

J. C. P. Heggie, P. Barnes, L. Cartwright, J. Diffey, J. Tse, J. Herley, I. D. McLean, F. J. Thomson, R. K. Grewal, L. T. Collins
2017 Australasian physical & engineering sciences in medicine  
At this time the technology of digital imaging is undergoing significant development and there is still a lack of full international consensus about some of the detailed Quality Control (QC) tests that  ...  For completeness, this document also includes a review of the QA programs required for the various types of digital biopsy units used in mammography.  ...  Facility Quality Control Procedures 3.1 Introduction As in screen/film mammography, facility quality control procedures for digital mammography systems are essential for ensuring production of high quality  ... 
doi:10.1007/s13246-017-0583-x pmid:28914430 fatcat:huxzxhkpbngzxjv72nkspd64vy
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